feat(telemetry): complete bb-buff.1.3 - Backend Liveness Refactor

STORY:
The session backend needed to aggregate agent health from a live
telemetry stream rather than static bead metadata. This refactor
makes liveness signals real-time and accurate.

COLLABORATION:
We extended the ActivityEvent model with a native 'heartbeat' kind,
updated extendActivityLease() to emit through the activity bus, and
refactored getAgentLivenessMap() to prioritize heartbeat activity
history over stale bead metadata.

DELIVERABLES:
- ActivityEvent extended with 'heartbeat' kind
- extendActivityLease() emits heartbeats through activity bus
- getAgentLivenessMap() prefers telemetry over static metadata
- Registry APIs support projectRoot injection for testing
- Tests verify preference logic via TDD

VERIFICATION:
- 93/93 tests PASSING
- Heartbeat override verified in isolated temp projects

CLOSES: bb-buff.1.3
BLOCKS: bb-buff.3.2, bb-buff.3.3, bb-buff.2.1

src/lib/parser.ts

@@ -2,6 +2,7 @@ import type { BeadDependency, BeadIssue, ParseableBeadIssue } from './types';
 
 export interface ParseIssuesOptions {
   includeTombstones?: boolean;
+  skipAgentFilter?: boolean;
 }
 
 function normalizeDependencies(value: unknown): BeadDependency[] {